WebRNAontheBENCH: computational and empirical resources for benchmarking RNAseq quantification and differential expression methods. PL Germain, A Vitriolo, A Adamo, P Laise, V Das, G Testa. Nucleic acids research 44 (11), 5054-5067, 2016. 51: 2016: hLGDB: a database of human lysosomal genes and their regulation. Archive related to Germain et al., NAR 2016. This package provides empirical and computational resources for benchmarking RNAseq analysis methods, harnessing a number of features: 1. a RNAseq dataset from 12 human iPSC lines all including ExFold ERCC spike-ins (92 transcripts in known concentrations, … See more Benchmarking a quantification can be done using a series of functions making specific comparisons (see ?compareWithNanostring, ?analyzeSpikein, … See more The package also includes a number of functions to benchmark differential expression analysis methods, based either 1. on the Nanostring data 2. on the … See more
The RNAontheBENCH package - Github
WebRNAontheBENCH: computational and empirical resources for benchmarking RNAseq quantification and differential expression methods. Pierre-Luc Germain, Alessandro … WebRNAontheBENCH: Computational and empirical resources for benchmarking RNAseq quantification and differential expression methods. Germain P; Vitriolo A; Adamo A; et al. See more; Nucleic Acids Research (2016) 44(11) 5054-5067. DOI: 10.1093/nar/gkw448. 22 Citations. Citations of this article. blinn college football roster 2011
RNAontheBENCH: computational and empirical resources for …
WebJun 20, 2016 · RNAontheBENCH: computational and empirical resources for benchmarking RNAseq quantification and differential expression methods Nucleic Acids Res . 2016 Jun … WebRNA sequencing (RNAseq) has become the method of choice for transcriptome analysis, yet no consensus exists as to the most appropriate pipeline for its analysis, with current benchmarks suffering important limitations. Here, we address these WebMay 25, 2024 · In plger/RNAontheBENCH: RNAontheBENCH - Benchmark of RNAseq quantification and DEA. Description Usage Arguments Value. View source: … fred\u0027s garden services